The annotation score provides a heuristic measure of the annotation content of a orsini-gotha.comKB entry or proteome. This score cannot be used as a measure of the accuracy of the annotation as we cannot define the "correct annotation" for any given protein.More...
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This indicates the type of evidence that supports the existence of the protein. Cảnh báo that the "protein existence" evidence does not give information on the accuracy or correctness of the sequence(s) displayed.More...
Select a section on the left to lớn see content.
This section provides any useful information about the protein, mostly biological knowledge.More...
FunctioniCautionThe sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported
Information which has been imported from another database using automatic procedures.
More...
Automatic assertion inferred from database entriesiThe ren Ontology (GO) project provides a phối of hierarchical controlled vocabulary split into 3 categories:More...
GO - Molecular functioniComplete GO annotation on QuickGO ...
GO - Biological processi
Complete GO annotation on QuickGO ...
orsini-gotha.comKB từ khóa constitute a controlled vocabulary with a hierarchical structure. Từ khoá summarise the content of a orsini-gotha.comKB entry and facilitate the tìm kiếm for proteins of interest.More...
Keywordsi| Molecular function | KinaseImported Automatic assertion inferred from database entriesi , Transferase |
This section provides information about the protein & gene name(s) và synonym(s) & about the organism that is the source of the protein sequence.More...
Names và Taxonomyi| This subsection of the Names & taxonomy section provides an exhaustive menu of all names of the protein, from commonly used khổng lồ obsolete, khổng lồ allow unambiguous identification of a protein.More... Protein namesi | Submitted name: Dihydroxyacetone kinase, subunit PtnKImported Automatic assertion inferred from database entriesi (EC:2.7.1.-ImportedAutomatic assertion inferred from database entriesi ) |
| This subsection of the Names and taxonomy section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: "Name", "Synonyms", "Ordered locus names" & "ORF names".More... Gene namesi | Name:ptnKImported Automatic assertion inferred from database entriesi ORF Names:ESCAB7627_3351Imported Automatic assertion inferred from database entriesi |
| This subsection of the Names và taxonomy section provides information on the name(s) of the organism that is the source of the protein sequence.More... Organismi | Escherichia albertii (strain TW07627)Imported Automatic assertion inferred from database entriesi |
| This subsection of the Names and taxonomy section shows the chất lượng identifier assigned by the NCBI to lớn the source organism of the protein. This is known as the "taxonomic identifier" or "taxid".More... Taxonomic identifieri | 502347 |
| This subsection of the Names & taxonomy section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.More... Taxonomic lineagei | cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacterales › Enterobacteriaceae › Escherichia › Escherichia albertii |
| This subsection of the Names & taxonomy section is present for entries that are part of a proteome, i.e. Of a phối of proteins thought to be expressed by organisms whose genomes have been completely sequenced.More... Proteomesi |
This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.More...
InteractioniProtein-protein interaction databasesSTRING: functional protein association networks More...STRINGi | 502347.ESCAB7627_3351 |
This section provides information on the tertiary and secondary structure of a protein.More...
StructureiThis section provides information on sequence similarities with other proteins & the domain(s) present in a protein.More...Family và Domainsi
Domains và Repeats| This subsection of the Family and Domains section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.More... Domaini | 6 – 206 | DhaLInterPro annotation Information which has been generated by the orsini-gotha.comKB automatic annotation system, without manual validation. More... Automatic assertion inferred from signature matchiAdd BLAST | 201 |
evolutionary genealogy of genes: Non-supervised Orthologous Groups More...eggNOGi | COG1461, Bacteria |
The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms More...HOGENOMi | CLU_066424_4_0_6 |
Gene3D Structural và Functional Annotation of Protein Families More...Gene3Di | 1.25.40.340, 1 hit |
Integrated resource of protein families, domains và functional sites More...InterProi | View protein in InterProIPR012737, DhaK_L_YcgSIPR004007, DhaL_domIPR036117, DhaL_dom_sf |
Pfam protein tên miền database More...Pfami | View protein in PfamPF02734, Dak2, 1 hit |
Simple Modular Architecture Research Tool; a protein tên miền database More...SMARTi | View protein in SMARTSM01120, Dak2, 1 hit |
Superfamily database of structural & functional annotation More...SUPFAMi | SSF101473, SSF101473, 1 hit |
TIGRFAMs; a protein family database More...TIGRFAMsi | TIGR02365, dha_L_ycgS, 1 hit |
PROSITE; a protein domain và family database More...PROSITEi | View protein in PROSITEPS51480, DHAL, 1 hit |
This section displays by default the canonical protein sequence & upon request all isoforms described in the entry. It also includes information pertinent lớn the sequence(s), including length và molecular weight. The information is filed in different subsections. The current subsections & their content are listed below:More...
SequenceiThis subsection of the Sequence section indicates if the canonical sequence displayed by default in the entry is complete or not.More...
Sequence statusi: Complete.B1EMZ4-1
The checksum is a khung of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.
It should be noted that while, in theory, two different sequences could
have the same checksum value, the likelihood that this would happen
is extremely low.
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However orsini-gotha.comKB may contain entries with identical sequences in case of multiple genes (paralogs).
The checksum is computed as the sequence 64-bit Cyclic Redundancy kiểm tra value (CRC64) using the generator polynomial: x64 + x4 + x3 + x + 1. The algorithm is described in the ISO 3309 standard.
Press W.H., Flannery B.P., Teukolsky S.A. And Vetterling W.T. Cyclic redundancy and other checksums Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993))
Checksum:iD7ABF565D8889A8ABLASTProtParamProtScaleCompute pI/MWPeptideMassPeptideCutterGO